Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAJ66880.1 | CAJ67033.1 | CD630_00650 | CD630_02120 | Putative NADP-dependent deshydrogenase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: up-regulated in Spo0A mutant PMID:24568651. | Putative sulfatase. | 0.603 |
CAJ66880.1 | glgC | CD630_00650 | CD630_08820 | Putative NADP-dependent deshydrogenase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: up-regulated in Spo0A mutant PMID:24568651. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.437 |
CAJ66981.1 | CAJ67033.1 | CD630_01620 | CD630_02120 | Putative radical SAM-family protein. | Putative sulfatase. | 0.632 |
CAJ67033.1 | CAJ66880.1 | CD630_02120 | CD630_00650 | Putative sulfatase. | Putative NADP-dependent deshydrogenase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: up-regulated in Spo0A mutant PMID:24568651. | 0.603 |
CAJ67033.1 | CAJ66981.1 | CD630_02120 | CD630_01620 | Putative sulfatase. | Putative radical SAM-family protein. | 0.632 |
CAJ67033.1 | CAJ69636.1 | CD630_02120 | CD630_27490 | Putative sulfatase. | Putative radical SAM-family protein. | 0.633 |
CAJ67033.1 | bdhA | CD630_02120 | CD630_26790 | Putative sulfatase. | 3-hydroxybutyrate dehydrogenase. | 0.655 |
CAJ67033.1 | fabG | CD630_02120 | CD630_11820 | Putative sulfatase. | 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase); Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.603 |
CAJ67033.1 | fabG-2 | CD630_02120 | CD630_25770 | Putative sulfatase. | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase). | 0.603 |
CAJ67033.1 | glgC | CD630_02120 | CD630_08820 | Putative sulfatase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.522 |
CAJ67033.1 | licC | CD630_02120 | CD630_02110 | Putative sulfatase. | CTP:phosphocholine cytidylyltransferase. | 0.757 |
CAJ67033.1 | rpoA | CD630_02120 | CD630_00980 | Putative sulfatase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.558 |
CAJ67033.1 | srlD | CD630_02120 | CD630_07680 | Putative sulfatase. | Sorbitol 6-phosphate 2-dehydrogenase (Glucitol); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.603 |
CAJ69636.1 | CAJ67033.1 | CD630_27490 | CD630_02120 | Putative radical SAM-family protein. | Putative sulfatase. | 0.633 |
bdhA | CAJ67033.1 | CD630_26790 | CD630_02120 | 3-hydroxybutyrate dehydrogenase. | Putative sulfatase. | 0.655 |
bdhA | glgC | CD630_26790 | CD630_08820 | 3-hydroxybutyrate dehydrogenase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.434 |
fabG | CAJ67033.1 | CD630_11820 | CD630_02120 | 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase); Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Putative sulfatase. | 0.603 |
fabG | fabG-2 | CD630_11820 | CD630_25770 | 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase); Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase). | 0.908 |
fabG | glgC | CD630_11820 | CD630_08820 | 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase); Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.434 |
fabG-2 | CAJ67033.1 | CD630_25770 | CD630_02120 | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase). | Putative sulfatase. | 0.603 |
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