STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ67195.2Putative membrane protein Tn916-like,CTn1-Orf18. (735 aa)    
Predicted Functional Partners:
CAJ67196.1
Putative ATPase Tn916-like, CTn1-Orf19.
 
    0.954
CAJ67194.1
Putative cell wall hydrolase Tn916-like,CTn1-Orf17.
 
  
 0.951
CAJ67197.1
Putative conjugative transposon protein Tn916-like, CTn1-Orf20.
 
    0.949
CAJ67193.1
Putative conjugative transposon protein Tn916-like, CTn1-Orf16.
 
  
 0.947
CAJ67198.1
Putative antirestriction protein Tn916-like,CTn1-Orf21.
 
    0.894
CAJ67200.1
Putative conjugative transposon protein Tn916-like, CTn1-Orf24.
 
    0.871
CAJ67199.1
Putative antirestriction protein Tn916-like,CTn1-Orf22.
 
    0.864
CAJ67202.1
Putative replication initiation factor Tn916-like, CTn1-Orf26.
 
    0.842
CAJ67204.1
Putative cell-division FtsK/SpoIIIE-family protein Tn916-like, CTn1-Orf28.
 
    0.833
CAJ70236.1
Putative ATPase Tn916-like, CTn6-Orf15.
 
    0.814
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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