STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ67389.2Putative sugar isomerase / endonuclease; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant PMID:24568651. (251 aa)    
Predicted Functional Partners:
sip2A
Signal peptidase type I; Belongs to the peptidase S26 family.
  
    0.788
CAJ70577.1
Transcriptional regulator, TPR family.
  
    0.765
CAJ69027.2
Putative transporter.
  
     0.764
CAJ68651.1
Putative lipoprotein.
 
    0.763
CAJ68188.1
Putative DNA helicase, UvrD/REP type.
  
    0.760
CAJ67878.1
Conserved hypothetical protein.
 
  
 0.755
YccF
Conserved hypothetical protein.
  
    0.729
MreD
Putative permease.
  
    0.721
CAJ70426.1
Uncharacterised protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant PMID:24568651. Experimentally verified as part of mature spore proteome PMID:19542279.
  
     0.703
CAJ67392.1
Transcriptional regulator, ArsR family.
 
    0.702
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.