Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAJ67450.1 | CAJ67452.1 | CD630_06180 | CD630_06200 | Transcriptional regulator, LytR family; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Conserved hypothetical protein. | 0.413 |
CAJ67450.1 | CCA62805.1 | CD630_06180 | CD630_06210 | Transcriptional regulator, LytR family; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Putative membrane protein. | 0.413 |
CAJ67450.1 | YvrJ | CD630_06180 | CD630_06190 | Transcriptional regulator, LytR family; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Conserved hypothetical protein. | 0.453 |
CAJ67452.1 | CAJ67450.1 | CD630_06200 | CD630_06180 | Conserved hypothetical protein. | Transcriptional regulator, LytR family; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.413 |
CAJ67452.1 | CAJ67453.1 | CD630_06200 | CD630_06220 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.652 |
CAJ67452.1 | CCA62805.1 | CD630_06200 | CD630_06210 | Conserved hypothetical protein. | Putative membrane protein. | 0.773 |
CAJ67452.1 | YvrJ | CD630_06200 | CD630_06190 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.824 |
CAJ67453.1 | CAJ67452.1 | CD630_06220 | CD630_06200 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.652 |
CAJ67453.1 | CCA62805.1 | CD630_06220 | CD630_06210 | Conserved hypothetical protein. | Putative membrane protein. | 0.410 |
CAJ67453.1 | YvrJ | CD630_06220 | CD630_06190 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.593 |
CCA62805.1 | CAJ67450.1 | CD630_06210 | CD630_06180 | Putative membrane protein. | Transcriptional regulator, LytR family; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.413 |
CCA62805.1 | CAJ67452.1 | CD630_06210 | CD630_06200 | Putative membrane protein. | Conserved hypothetical protein. | 0.773 |
CCA62805.1 | CAJ67453.1 | CD630_06210 | CD630_06220 | Putative membrane protein. | Conserved hypothetical protein. | 0.410 |
CCA62805.1 | YvrJ | CD630_06210 | CD630_06190 | Putative membrane protein. | Conserved hypothetical protein. | 0.757 |
YvrJ | CAJ67450.1 | CD630_06190 | CD630_06180 | Conserved hypothetical protein. | Transcriptional regulator, LytR family; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.453 |
YvrJ | CAJ67452.1 | CD630_06190 | CD630_06200 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.824 |
YvrJ | CAJ67453.1 | CD630_06190 | CD630_06220 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.593 |
YvrJ | CCA62805.1 | CD630_06190 | CD630_06210 | Conserved hypothetical protein. | Putative membrane protein. | 0.757 |