STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ67656.1ABC-type transport system, multidrug-family ATP-binding protein. (307 aa)    
Predicted Functional Partners:
CAJ67657.1
ABC-type transport system, multidrug-family permease.
 
 
 0.990
CAJ67658.1
ABC-type transport system, multidrug-family permease.
 
 
 0.989
CAJ68397.1
ABC-type transport system, ATP-binding protein.
 
 
   
0.886
cbiO1
ABC-type transport system, cobalt-specific ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
   
0.879
CAJ67655.1
Two-component sensor histidine kinase.
 
    0.874
CAJ67940.1
ABC-type transport system, multidrug-family permease Tn1549-like, CTn4-Orf29.
  
 
 0.829
CAJ67139.1
ABC-type transport system, permease.
  
 
 0.815
CAJ67939.2
ABC-type transport system, multidrug-family permease Tn1549-like, CTn4-Orf30.
 
  
 0.798
CAJ67138.1
ABC-type transport system, permease.
 
  
 0.784
CAJ67942.1
Two-component sensor histidine kinase,Tn1549-like, CTn4-Orf27.
 
    0.775
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.