Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CAJ67742.1Putative phage protein. (264 aa)    
Predicted Functional Partners:
CAJ69822.2
Putative phage endodeoxyribonuclease RusA-like.
 
    0.704
CAJ67741.1
Transcriptional regulator, Phage-type.
  
    0.691
CAJ67772.1
Putative phage endodeoxyribonuclease.
 
     0.673
CAJ67743.1
Putative phage protein.
  
    0.610
cwp8
Cell wall binding protein cwp8.
  
    0.561
CAJ67750.1
Putative phage protein involved in bacteriophage resistance.
 
     0.546
CAJ69836.1
Putative bacteriophage resistance protein.
 
     0.543
cprC
ABC-type transport system,lantibiotic/multidrug-family permease; PMID:20974818.
  
    0.541
CAJ67751.1
Putative phage recombination protein Bet.
 
    0.529
CAJ67786.1
Putative phage major capsid protein.
 
    0.508
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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