STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwp16Putative N-acetylmuramoyl-L-alanine amidase,autolysin cwp16. (672 aa)    
Predicted Functional Partners:
CAJ69663.1
Putative glycerophosphotransferase.
  
    0.720
CAJ69604.1
Putative sporulation protein.
 
    0.691
CAJ68394.1
ABC-type transport system, permease.
 
     0.674
acd
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase.
  
 0.671
CAJ69664.1
Putative glycosyl transferase, family 2.
 
     0.642
CAJ68261.1
Putative muramoyltetrapeptide carboxypeptidase,S66 family.
 
 
 0.607
CAJ69836.1
Putative bacteriophage resistance protein.
  
     0.594
CAJ69658.1
Putative glycosyl transferase, group 1.
 
    0.582
CAJ67750.1
Putative phage protein involved in bacteriophage resistance.
  
     0.571
CAJ68274.1
Conserved hypothetical protein.
  
    0.564
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.