STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ67953.1Putative antirestriction protein Tn1549-like,CTn4-Orf16. (1343 aa)    
Predicted Functional Partners:
CAJ67951.1
Putative conjugative transposon protein Tn1549-like, CTn4-Orf18.
 
    0.951
CAJ67956.1
Putative cell surface protein Tn1549-like,CTn4-Orf13.
 
    0.892
CAJ67957.1
Putative conjugative transposon protein Tn1549-like, CTn4-Orf12.
 
    0.890
CAJ67958.1
Putative conjugative transposon protein Tn1549-like, CTn4-Orf11.
 
    0.869
CAJ67961.1
Putative conjugative transposon protein Tn1549-like, CTn4-Orf8.
 
    0.858
CAJ67968.1
Putative conjugative transposon protein Tn1549-like, CTn4-Orf1.
 
    0.819
CAJ67952.1
Putative conjugative transposon protein Tn1549-like, CTn4-Orf17.
  
    0.812
CAJ67946.1
Putative mobilization protein Tn1549-like,CTn4-Orf23.
 
  
 0.799
topB
DNA topoisomerase III; Tn1549-like, CTn4-Orf15.
 
    0.797
CAJ67947.1
Putative endonuclease relaxase Tn1549-like,CTn4-Orf22.
 
    0.795
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.