STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ68076.1Putative phage integrase site-specific recombinase XerD-like; Belongs to the 'phage' integrase family. (304 aa)    
Predicted Functional Partners:
CAJ68075.1
Putative membrane protein.
  
    0.799
drm
Phosphopentomutase (Phosphodeoxyribomutase); Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
  
  
 0.715
ftsK
DNA FtsK/SpoIIIE translocase; Belongs to the FtsK/SpoIIIE/SftA family.
 
  
 0.639
nudF
Putative hydrolase, NUDIX family; Belongs to the Nudix hydrolase family.
  
  
 0.633
CAJ68073.1
Conserved hypothetical protein.
  
    0.605
CAJ68072.1
Putative glycosyl transferase.
  
    0.578
pupG
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
    0.576
CAJ68071.1
Putative glycosyl transferase, family 2.
  
  
 0.565
CAJ68070.1
Conserved hypothetical protein.
  
    0.555
CAJ68069.1
Putative thiamine diphosphokinase.
  
    0.517
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.