STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ68290.1Putative magnesium transporter; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (224 aa)    
Predicted Functional Partners:
CAJ67860.1
Conserved hypothetical protein.
  
    0.553
CAJ69721.1
Putative calcium-transporting ATPase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant PMID:24568651.
  
 
 0.508
CAJ68502.1
Putative calcium-transporting ATPase.
  
 
 0.484
CAJ68694.1
P-type calcium transport ATPase.
  
 
 0.480
CAJ68524.1
Cation-transporting ATPase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651.
  
 
 0.479
CAJ69389.1
Putative cation-transporting P-type ATPase.
  
 
 0.479
mgtA
Magnesium-transporting ATPase, P-type 1; Tn916-like, CTn7-Orf7.
  
 
 0.479
mgtA1
Magnesium-transporting ATPase, P-type 1; Tn916-like, CTn7-Orf12.
  
 
 0.479
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.