STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ68818.1Uncharacterised protein; Experimentally verified as part of mature spore proteome PMID:19542279. (106 aa)    
Predicted Functional Partners:
CAJ68136.1
Fe-s iron-sulfur cluster assembly protein, nifu family.
  
  
 0.871
CAJ67684.1
Putative NifU-like protein.
  
 
 0.745
CAJ68274.1
Conserved hypothetical protein.
  
    0.741
CAJ67623.2
Conserved hypothetical protein.
    
 
 0.706
CAJ70515.1
Putative iron-sulfur assembly protein.
  
 
 0.692
CAJ70516.1
ABC-type transport system, ATP-binding protein.
  
 
 0.669
iscS1
Cysteine desulfurase.
  
  
 0.662
iscS2
Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
  
  
 0.661
CAJ69604.1
Putative sporulation protein.
  
   
 0.576
cwp12
Cell wall binding protein cwp12.
  
     0.573
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.