Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Baat | CAJ68840.1 | CD630_19660 | CD630_19650 | Putative acyl-CoA thioesterase. | Putative permease. | 0.477 |
CAJ68839.1 | CAJ68840.1 | CD630_19640 | CD630_19650 | Putative transcriptional regulator. | Putative permease. | 0.458 |
CAJ68840.1 | Baat | CD630_19650 | CD630_19660 | Putative permease. | Putative acyl-CoA thioesterase. | 0.477 |
CAJ68840.1 | CAJ68839.1 | CD630_19650 | CD630_19640 | Putative permease. | Putative transcriptional regulator. | 0.458 |
CAJ68840.1 | PurC1 | CD630_19650 | CD630_04890 | Putative permease. | Putative phosphoribosylaminoimidazole-succinocarboxamide synthetase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | 0.457 |
CAJ68840.1 | abfD | CD630_19650 | CD630_23410 | Putative permease. | Gamma-aminobutyrate metabolism dehydratase/isomerase [includes: 4-hydroxybutyryl-coa dehydratase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.719 |
CAJ68840.1 | guaA | CD630_19650 | CD630_01980 | Putative permease. | Fragment of conserved hypothetical protein,DUF111 family; Catalyzes the synthesis of GMP from XMP. | 0.526 |
CAJ68840.1 | purC | CD630_19650 | CD630_02190 | Putative permease. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.457 |
CAJ68840.1 | purD | CD630_19650 | CD630_02240 | Putative permease. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.488 |
CAJ68840.1 | purE | CD630_19650 | CD630_02180 | Putative permease. | Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.471 |
CAJ68840.1 | purG | CD630_19650 | CD630_02210 | Putative permease. | Phosphoribosylformylglycinamidine cyclo-ligase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | 0.452 |
CAJ68840.1 | purL | CD630_19650 | CD630_02250 | Putative permease. | Phosphoribosylformylglycinamidine synthase. | 0.868 |
PurC1 | CAJ68840.1 | CD630_04890 | CD630_19650 | Putative phosphoribosylaminoimidazole-succinocarboxamide synthetase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | Putative permease. | 0.457 |
PurC1 | guaA | CD630_04890 | CD630_01980 | Putative phosphoribosylaminoimidazole-succinocarboxamide synthetase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | Fragment of conserved hypothetical protein,DUF111 family; Catalyzes the synthesis of GMP from XMP. | 0.745 |
PurC1 | purC | CD630_04890 | CD630_02190 | Putative phosphoribosylaminoimidazole-succinocarboxamide synthetase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.938 |
PurC1 | purD | CD630_04890 | CD630_02240 | Putative phosphoribosylaminoimidazole-succinocarboxamide synthetase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.965 |
PurC1 | purE | CD630_04890 | CD630_02180 | Putative phosphoribosylaminoimidazole-succinocarboxamide synthetase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.990 |
PurC1 | purG | CD630_04890 | CD630_02210 | Putative phosphoribosylaminoimidazole-succinocarboxamide synthetase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | Phosphoribosylformylglycinamidine cyclo-ligase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | 0.965 |
PurC1 | purL | CD630_04890 | CD630_02250 | Putative phosphoribosylaminoimidazole-succinocarboxamide synthetase; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | Phosphoribosylformylglycinamidine synthase. | 0.999 |
abfD | CAJ68840.1 | CD630_23410 | CD630_19650 | Gamma-aminobutyrate metabolism dehydratase/isomerase [includes: 4-hydroxybutyryl-coa dehydratase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Putative permease. | 0.719 |
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