Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAJ68559.1 | CAJ68872.1 | CD630_16920 | CD630_19940 | Transcriptional regulator, ArsR family. | Putative membrane protein, DUF1648 family. | 0.598 |
CAJ68559.1 | CAJ68873.2 | CD630_16920 | CD630_19941 | Transcriptional regulator, ArsR family. | Transcriptional regulator, ArsR family. | 0.473 |
CAJ68871.1 | CAJ68872.1 | CD630_19930 | CD630_19940 | Putative decarboxylase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | Putative membrane protein, DUF1648 family. | 0.425 |
CAJ68871.1 | CAJ68873.2 | CD630_19930 | CD630_19941 | Putative decarboxylase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | Transcriptional regulator, ArsR family. | 0.453 |
CAJ68872.1 | CAJ68559.1 | CD630_19940 | CD630_16920 | Putative membrane protein, DUF1648 family. | Transcriptional regulator, ArsR family. | 0.598 |
CAJ68872.1 | CAJ68871.1 | CD630_19940 | CD630_19930 | Putative membrane protein, DUF1648 family. | Putative decarboxylase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | 0.425 |
CAJ68872.1 | CAJ68873.2 | CD630_19940 | CD630_19941 | Putative membrane protein, DUF1648 family. | Transcriptional regulator, ArsR family. | 0.978 |
CAJ68873.2 | CAJ68559.1 | CD630_19941 | CD630_16920 | Transcriptional regulator, ArsR family. | Transcriptional regulator, ArsR family. | 0.473 |
CAJ68873.2 | CAJ68871.1 | CD630_19941 | CD630_19930 | Transcriptional regulator, ArsR family. | Putative decarboxylase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. | 0.453 |
CAJ68873.2 | CAJ68872.1 | CD630_19941 | CD630_19940 | Transcriptional regulator, ArsR family. | Putative membrane protein, DUF1648 family. | 0.978 |