STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ68947.1Conserved hypothetical protein. (332 aa)    
Predicted Functional Partners:
CD630_19280
Fragment of transcription regulator, AraC family (C-terminal region); Direct repeat flanking the inserted geneomic island.
  
     0.744
YccF
Conserved hypothetical protein.
  
     0.691
CAJ68279.1
Putative membrane protein.
  
     0.673
CD630_03500
Fragment of conserved hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family.
  
    0.643
CAJ68689.1
Putative membrane protein.
  
    0.595
EcsC
Conserved hypothetical protein.
  
     0.560
cwp7
Cell wall binding protein cwp7.
  
    0.536
CAJ68948.1
Conserved hypothetical protein.
  
    0.531
CAJ68804.1
Putative membrane protein.
  
     0.516
CAJ67020.1
Putative membrane-associated nucleotidase; Belongs to the 5'-nucleotidase family.
  
     0.512
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.