Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAJ69037.1 | CAJ69038.1 | CD630_21530 | CD630_21540 | Conserved hypothetical protein. | Putative ATP/GTP-binding protein. | 0.966 |
CAJ69037.1 | CAJ69041.1 | CD630_21530 | CD630_21570 | Conserved hypothetical protein. | Uncharacterised protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.446 |
CAJ69037.1 | bioB1 | CD630_21530 | CD630_21550 | Conserved hypothetical protein. | Biotin synthase. | 0.940 |
CAJ69037.1 | thiH-2 | CD630_21530 | CD630_21560 | Conserved hypothetical protein. | Thiamine biosynthesis protein ThiH; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.924 |
CAJ69038.1 | CAJ69037.1 | CD630_21540 | CD630_21530 | Putative ATP/GTP-binding protein. | Conserved hypothetical protein. | 0.966 |
CAJ69038.1 | CAJ69041.1 | CD630_21540 | CD630_21570 | Putative ATP/GTP-binding protein. | Uncharacterised protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.465 |
CAJ69038.1 | bioB1 | CD630_21540 | CD630_21550 | Putative ATP/GTP-binding protein. | Biotin synthase. | 0.978 |
CAJ69038.1 | thiH-2 | CD630_21540 | CD630_21560 | Putative ATP/GTP-binding protein. | Thiamine biosynthesis protein ThiH; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.982 |
CAJ69041.1 | CAJ69037.1 | CD630_21570 | CD630_21530 | Uncharacterised protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Conserved hypothetical protein. | 0.446 |
CAJ69041.1 | CAJ69038.1 | CD630_21570 | CD630_21540 | Uncharacterised protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Putative ATP/GTP-binding protein. | 0.465 |
CAJ69041.1 | bioB1 | CD630_21570 | CD630_21550 | Uncharacterised protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Biotin synthase. | 0.540 |
CAJ69041.1 | thiH-2 | CD630_21570 | CD630_21560 | Uncharacterised protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Thiamine biosynthesis protein ThiH; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.540 |
bioB1 | CAJ69037.1 | CD630_21550 | CD630_21530 | Biotin synthase. | Conserved hypothetical protein. | 0.940 |
bioB1 | CAJ69038.1 | CD630_21550 | CD630_21540 | Biotin synthase. | Putative ATP/GTP-binding protein. | 0.978 |
bioB1 | CAJ69041.1 | CD630_21550 | CD630_21570 | Biotin synthase. | Uncharacterised protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.540 |
bioB1 | thiH-2 | CD630_21550 | CD630_21560 | Biotin synthase. | Thiamine biosynthesis protein ThiH; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.895 |
thiH-2 | CAJ69037.1 | CD630_21560 | CD630_21530 | Thiamine biosynthesis protein ThiH; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Conserved hypothetical protein. | 0.924 |
thiH-2 | CAJ69038.1 | CD630_21560 | CD630_21540 | Thiamine biosynthesis protein ThiH; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Putative ATP/GTP-binding protein. | 0.982 |
thiH-2 | CAJ69041.1 | CD630_21560 | CD630_21570 | Thiamine biosynthesis protein ThiH; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Uncharacterised protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | 0.540 |
thiH-2 | bioB1 | CD630_21560 | CD630_21550 | Thiamine biosynthesis protein ThiH; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. | Biotin synthase. | 0.895 |