STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ69086.1Transporter, Major Facilitator Superfamily (MFS). (476 aa)    
Predicted Functional Partners:
CAJ66847.1
Putative glycoside hydrolase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.694
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
  
 0.580
VorC2
Putative 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
    0.530
VorB2
Putative ferredoxin/flavodoxin oxidoreductase,alpha subunit.
  
    0.528
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.521
VorA'2
Putative ferredoxin/flavodoxin oxidoreductase,gamma subunit.
  
    0.516
VorA2
Putative ferredoxin/flavodoxin oxidoreductase,beta subunit.
  
    0.516
phnXW
Bifunctional phosphonoacetaldehyde hydrolase/aminoethylphosphonate transaminase; Involved in phosphonate degradation; In the N-terminal section; belongs to the HAD-like hydrolase superfamily. PhnX family.
  
  
 0.458
XylS
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.435
CAJ69080.1
Putative succinyl-CoA synthetase-like ATP-binding protein.
  
    0.402
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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