STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ69095.1ABC-type transport system, multidrug-family ATP-binding/permease. (610 aa)    
Predicted Functional Partners:
CAJ69056.1
ABC-type transport system,cystine/aminoacid-family ATP-binding protein.
 
     
0.899
CAJ69421.1
ABC-type transport system, ATP-binding protein.
     
0.867
CAJ69096.1
ABC-type transport system, multidrug-family ATP-binding/permease.
 
   
0.845
CAJ68404.1
ABC-type transport system, ATP-binding protein.
     
0.841
CAJ69097.1
Transcriptional regulator, MarR family.
  
  
 0.836
cbiO1
ABC-type transport system, cobalt-specific ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
   
0.780
CAJ68397.1
ABC-type transport system, ATP-binding protein.
     
0.777
CAJ67684.1
Putative NifU-like protein.
      
 0.636
CAJ67683.1
Putative glutamate carboxypeptidase.
   
  
 0.618
CAJ68331.1
ABC-type transport system, ATP-binding protein.
     
0.617
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.