STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ69140.1Asp/Glu racemase; Belongs to the aspartate/glutamate racemases family. (228 aa)    
Predicted Functional Partners:
racX
Putative aspartate racemase RacX; Belongs to the aspartate/glutamate racemases family.
  
  
 
0.928
asnB
Asparagine synthetase [glutamine-hydrolyzing].
    
 0.913
asnB1
Asparagine synthetase.
    
 0.913
ansB
L-asparaginase.
    
 0.913
pyrB
Aspartate carbamoyltransferase (Aspartate transcarbamylase) (ATCase); Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.912
AspD
Putative L-aspartate-beta-decarboxylase; Experimentally verified as part of mature spore proteome PMID:19542279.
 
  
  0.912
nadB
L-aspartate oxidase (Quinolinate synthetase B).
     
 0.905
aspC
Aspartate aminotransferase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651.
  
 
  0.900
aspB
Aspartate aminotransferase (AspAT) (Transaminase A); Experimentally verified as part of mature spore proteome PMID:19542279.
    
  0.900
argG
Argininosuccinate synthase (Citrulline--aspartate ligase); Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.900
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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