STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwp9Cell wall binding protein cwp9. (467 aa)    
Predicted Functional Partners:
CAJ69685.1
Putative calcium-binding adhesion protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: up-regulated in Spo0A mutant PMID:24568651.
 
    0.745
CAJ69604.1
Putative sporulation protein.
  
    0.703
CAJ68394.1
ABC-type transport system, permease.
 
    0.701
CAJ69658.1
Putative glycosyl transferase, group 1.
  
  
 0.697
CAJ69663.1
Putative glycerophosphotransferase.
  
    0.680
CAJ69664.1
Putative glycosyl transferase, family 2.
  
    0.608
CAJ68274.1
Conserved hypothetical protein.
  
     0.594
cwp6
Putative N-acetylmuramoyl-L-alanine amidase,autolysin cwp6.
  
  
0.575
cwp14
Putative cell wall-binding protein cwp14.
 
  
0.571
cwp21
Putative cell surface peptidase, M4 family-cwp20.
 
  
0.561
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.