STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celCPTS system, cellobiose-specific IIA component. (105 aa)    
Predicted Functional Partners:
celA
PTS system, cellobiose-specific IIB component.
 
 0.995
celB
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.993
celF
Cellobiose-6-phosphate hydrolase, family 4.
 
 
 0.929
CAJ66956.1
PTS system, lactose/cellobiose-family IIB component.
 
 
 0.918
CAJ69974.1
PTS system, lactose/cellobiose-family IIB component.
 
 
 0.918
licB
PTS system, lichenan-specific IIB component.
 
 
 0.918
CAJ69942.1
PTS system, lactose/cellobiose-family IIB subunit.
 
 
 0.917
CAJ67694.1
PTS system, lactose/cellobiose-family IIB component.
 
 
 0.916
CAJ68467.1
PTS system, lactose/cellobiose-family IIB component.
 
 
 0.916
CAJ70347.1
PTS system, lactose/cellobiose-family IIB component.
 
 
 0.916
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.