STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ69836.1Putative bacteriophage resistance protein. (169 aa)    
Predicted Functional Partners:
CAJ69834.1
Putative phage replication protein.
 
    0.840
CAJ69835.2
Putative phage essential recombination function protein.
  
    0.786
CAJ67751.1
Putative phage recombination protein Bet.
 
    0.697
CAJ67786.1
Putative phage major capsid protein.
  
     0.697
CAJ69808.1
Putative phage major capsid protein.
  
     0.697
CAJ70090.1
Putative phage-related protein.
 
    0.680
CAJ69840.1
Putative phage protein.
 
    0.652
CAJ67456.2
Putative phage protein.
 
    0.639
CAJ69833.1
Putative phage resolvase/integrase.
  
    0.620
CAJ69832.1
Putative phage single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
    0.618
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.