STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ69895.1Putative hydrolase/isomerase/hydratase. (300 aa)    
Predicted Functional Partners:
CAJ68477.1
Putative amidohydrolase.
 
    0.883
uxaA-3
D-galactate dehydratase/Altronate hydrolase.
 
    0.692
dapA1
Dihydrodipicolinate synthase 1; Belongs to the DapA family.
  
  
 0.609
adhE
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.582
adhE1
Aldehyde-alcohol dehydrogenase; Experimentally verified as part of mature spore proteome PMID:19542279; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.582
SuyA
Putative N-terminus region of carbohydrate hydrolase, SAF domain.
 
    0.491
gapN
Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (GADPH); Experimentally verified as part of mature spore proteome PMID:19542279; Belongs to the aldehyde dehydrogenase family.
  
 
 0.478
aldH
Aldehyde dehydrogenase (aldehyde:NAD+ oxidoreductase); Belongs to the aldehyde dehydrogenase family.
  
 
 0.478
eutE
Ethanolamine acetaldehyde oxydoreductase.
  
 
 0.477
sucD
Succinate-semialdehyde dehydrogenase (NAD(P)+); Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651.
  
 
 0.477
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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