Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAJ68128.1 | CAJ70005.1 | CD630_12720 | CD630_31130 | Putative magnesium chelatase. | Putative amidohydrolase. | 0.457 |
CAJ70004.1 | CAJ70005.1 | CD630_31120 | CD630_31130 | Putative peptidase, M20D family. | Putative amidohydrolase. | 0.548 |
CAJ70004.1 | CAJ70006.1 | CD630_31120 | CD630_31140 | Putative peptidase, M20D family. | Putative membrane protein. | 0.500 |
CAJ70004.1 | dapH | CD630_31120 | CD630_32270 | Putative peptidase, M20D family. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.456 |
CAJ70005.1 | CAJ68128.1 | CD630_31130 | CD630_12720 | Putative amidohydrolase. | Putative magnesium chelatase. | 0.457 |
CAJ70005.1 | CAJ70004.1 | CD630_31130 | CD630_31120 | Putative amidohydrolase. | Putative peptidase, M20D family. | 0.548 |
CAJ70005.1 | CAJ70006.1 | CD630_31130 | CD630_31140 | Putative amidohydrolase. | Putative membrane protein. | 0.705 |
CAJ70005.1 | dapH | CD630_31130 | CD630_32270 | Putative amidohydrolase. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.443 |
CAJ70006.1 | CAJ70004.1 | CD630_31140 | CD630_31120 | Putative membrane protein. | Putative peptidase, M20D family. | 0.500 |
CAJ70006.1 | CAJ70005.1 | CD630_31140 | CD630_31130 | Putative membrane protein. | Putative amidohydrolase. | 0.705 |
dapH | CAJ70004.1 | CD630_32270 | CD630_31120 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | Putative peptidase, M20D family. | 0.456 |
dapH | CAJ70005.1 | CD630_32270 | CD630_31130 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | Putative amidohydrolase. | 0.443 |