STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ70080.1Putative peptidase, M20 family. (395 aa)    
Predicted Functional Partners:
CAJ70079.1
Putative D-aminoacylase.
 
    0.941
dpaL
Diaminopropionate ammonia-lyase.
  
 0.921
dpaL1
Diaminopropionate ammonia-lyase.
  
 0.920
CAJ70078.1
Putative amidohydrolase.
 
  
 0.823
CAJ69747.1
Putative D-aminoacylase.
 
     0.662
pyrD2
Dihydroorotate dehydrogenase, catalytic subunit.
 
 
 0.615
XdhA5
Putative xanthine dehydrogenase.
 
  
 0.603
CAJ70075.1
D-hydantoinase (Dihydropyrimidinase).
 
  
 0.481
CAJ70077.1
Putative purine permease.
  
  
 0.477
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.