STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ70175.1PTS system, mannose/fructose/sorbose IIA component. (140 aa)    
Predicted Functional Partners:
CAJ70176.1
PTS system, mannose/fructose/sorbose IIB component.
 
 
 0.996
CAJ70173.1
PTS system, mannose/fructose/sorbose IID component.
 
 0.995
CAJ70174.1
PTS system, mannose/fructose/sorbose IIC component.
 
 0.995
CAJ67922.1
PTS system, mannose/fructose/sorbose IID component.
 
 0.976
CAJ67921.1
PTS system, mannose/fructose/sorbose IIC component.
 
 0.973
CAJ67920.1
PTS system, mannose/fructose/sorbose IIB component.
 
 
 0.971
ptsH
PTS system, HPr protein.
 
 0.960
CAJ67111.1
PTS system, mannose/fructose/sorbose IID component.
 
 
 0.878
CAJ67323.1
PTS system, mannose/fructose/sorbose IID component.
 
 
 0.878
xynD
PTS system, xyloside-specific IID component.
 
 
 0.875
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.