STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ70411.1Putative type IV pilin. (175 aa)    
Predicted Functional Partners:
CAJ70416.2
Putative type IV pilus transporter system,ATP-binding.
  
 
 0.821
CAJ70415.1
Putative type IV pilus secretion protein.
  
  
 0.813
CAJ70414.1
Putative membrane protein; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651.
  
  
 0.771
CAJ70408.1
Putative type IV prepilin peptidase, A24A family; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.720
CAJ70410.1
Conserved hypothetical protein.
  
    0.719
CAJ70413.1
Putative type IV pilus assembly protein.
  
  
 0.671
CAJ70412.1
Putative type IV pilin.
  
    0.661
CAJ70407.1
Putative type IV prepilin leader peptidase.
  
  
 0.645
CAJ70193.2
Putative pilus assembly ATPase.
  
 
 0.598
PilT
Putative twitching motility protein PilT.
  
  
 0.576
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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