STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ70417.1Putative pilin protein; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. (171 aa)    
Predicted Functional Partners:
CAJ70416.2
Putative type IV pilus transporter system,ATP-binding.
 
 
 0.947
CAJ70415.1
Putative type IV pilus secretion protein.
 
  
 0.943
CAJ70408.1
Putative type IV prepilin peptidase, A24A family; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.900
CAJ70192.1
Putative type II secretion system protein.
 
  
 0.894
CAJ70193.2
Putative pilus assembly ATPase.
 
 
 0.893
PilT
Putative twitching motility protein PilT.
 
  
 0.838
CAJ70414.1
Putative membrane protein; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651.
  
  
 0.713
CAJ70407.1
Putative type IV prepilin leader peptidase.
  
  
 0.568
CAJ70413.1
Putative type IV pilus assembly protein.
  
  
 0.564
CAJ68129.1
Putative DNA processing Smf single strand binding protein.
 
  
 0.527
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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