STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnLABC-type transport system, phosphonate-specific ATP-binding protein. (237 aa)    
Predicted Functional Partners:
phnM
Putative carbon-phosphorus lyase complex subunit.
 
 
 0.999
phnI
Putative phosphonate metabolism protein.
 
 0.999
phnH
Putative phosphonate metabolism protein.
 
 0.999
phnG
Putative phosphonate metabolism protein.
 
 0.999
phnJ
Putative phosphonate metabolism protein.
 
 0.996
phnK
ABC-type transport system, phosphonate-specific ATP-binding protein.
 
 
0.992
PhnPP
Putative polymerase/histidinol phosphatase-like.
 
    0.873
CAJ70434.1
ABC-type transport system, iron-family ATP-binding protein; Belongs to the ABC transporter superfamily.
     
0.798
CAJ70432.1
ABC-type transport system, iron-family extracellular solute-binding protein.
  
    0.741
CAJ70433.1
ABC-type transport system, iron-family permease.
  
    0.735
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.