Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CAJ70515.1Putative iron-sulfur assembly protein. (305 aa)    
Predicted Functional Partners:
CAJ70516.1
ABC-type transport system, ATP-binding protein.
 
 
 0.999
CAJ68136.1
Fe-s iron-sulfur cluster assembly protein, nifu family.
  
  
 0.940
SufS1
Putative aminotransferase; Experimentally verified as part of mature spore proteome PMID:19542279.
  
 
 0.782
YqeB
Conserved hypothetical protein.
  
 
 0.782
SufS2
Putative cysteine desulfurase family protein.
  
 
 0.782
CAJ68818.1
Uncharacterised protein; Experimentally verified as part of mature spore proteome PMID:19542279.
  
 
 0.528
CAJ68854.1
ABC-type transport system, extracellular solute-binding protein; Experimentally verified as part of mature spore proteome PMID:19542279.
  
   
 0.495
CAJ70514.1
Putative hydrolase.
       0.484
CAJ68853.1
ABC-type transport system, ATP-binding protein.
  
   
 0.480
CAJ70517.1
Conserved hypothetical protein.
       0.418
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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