STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ70575.1Conserved hypothetical protein. (87 aa)    
Predicted Functional Partners:
YedF
Selenium metabolism protein yedf; Experimentally verified as part of mature spore proteome PMID:19542279; Belongs to the sulfur carrier protein TusA family.
 
  
 0.801
CAJ70574.1
Conserved hypothetical protein.
  
    0.767
SufS2
Putative cysteine desulfurase family protein.
 
  
 0.573
CAJ70573.1
Putative aminotransferase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. Experimentally verified as part of mature spore proteome PMID:19542279.
  
    0.536
CAJ69320.1
Uncharacterised protein; Experimentally verified as part of mature spore proteome PMID:19542279.
  
    0.496
grdX
Putative glycine reductase complex component.
  
    0.473
CAJ70577.1
Transcriptional regulator, TPR family.
  
    0.430
grdB
Glycine reductase complex component B gamma subunit (selenocysteine); Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant PMID:24568651.
  
    0.425
grdE
Glycine reductase complex component B subunits alpha and beta (Selenoprotein PB alpha/beta) [Contains: Betaine reductase component B subunit beta; Betaine reductase component B subunit alpha].
  
    0.408
CAJ68104.1
Putative radical SAM-superfamily protein.
  
    0.405
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.