STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI0159Dehydrogenase (zinc-binding alcohol dehydrogenase). (327 aa)    
Predicted Functional Partners:
GDI2396
Putative fatty acid synthase.
  
0.948
GDI1830
Citrate synthase; Belongs to the citrate synthase family.
    
 0.745
mmsA
Puative methylmalonate-semialdehyde dehydrogenase.
   
  0.743
GDI1243
Putative enoyl-CoA hydratase.
    
  0.742
GDI0816
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.741
GDI1240
Putative Acetyl-CoA acetyltransferase (Acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.727
pta
Putative phosphate acetyltransferase.
     
 0.726
GDI0160
Conseved protein.
       0.608
GDI0161
Conserved hypothetical protein.
       0.608
GDI1720
Putative pyruvate dehydrogenase E2 component.
   
 0.582
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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