Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
lonPutative ATP-dependent protease. (224 aa)    
Predicted Functional Partners:
GDI0182
Conserved hypothetical protein; Belongs to the UPF0434 family.
       0.751
GDI0184
Thioredoxin protein.
     
 0.666
GDI0121
Putative metallophosphoesterase.
  
 
  0.604
GDI2823
Conserved hypothetical protein.
    
 0.553
GDI0124
Putative Ubiquitin-activating enzyme.
    
  0.549
moeB
Molybdopterin biosynthesis protein moeB.
    
  0.549
GDI2891
Putative ubiquitin-activating enzyme.
    
  0.549
GDI3836
Conserved hypothetical protein.
  
   0.531
GDI0768
Putative exonuclease.
    
  0.486
GDI0123
Conserved hypothetical protein.
    
  0.483
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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