STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI0198Putative 5-oxoprolinase (ATP-hydrolysing). (697 aa)    
Predicted Functional Partners:
GDI0197
Putative 5-oxoprolinase (ATP-hydrolysing).
 0.999
gltB
Putative glutamate synthase [NADPH] large chain precursor.
    
 0.925
putA
Putative bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.887
GDI3632
Putative amidohydrolase.
  
  
  0.875
GDI0199
Conserved hypothetical protein.
       0.595
GDI2694
Putative isochorismatase family protein rutB.
 
  
  0.591
GDI0348
Isochorismatase hydrolase.
 
  
  0.522
GDI3635
Putative sulfate trasporter.
  
  
  0.494
GDI0205
Putative allophanate hydrolase subunit 1.
    
  0.483
GDI0204
Putative allophanate hydrolase subunit 2.
    
  0.481
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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