Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GDI0247Putative ABC-type transporter, substrate binding protein. (562 aa)    
Predicted Functional Partners:
GDI0248
Putative inner membrane ABC transporter permease protein.
 
 0.994
GDI0249
Putative dipeptide transport system permease protein.
 
 0.991
GDI0250
Putative ABC transporter ATP-binding protein.
 0.978
GDI3534
Putative transport/binding protein.
 
 0.961
GDI0464
Putative ABC transporter, permease protein.
 
 0.948
GDI3533
Putative transport/binding protein.
 
 0.947
GDI0465
Putative ABC transporter, permease protein.
 
 0.941
luxA
Alkanal monooxygenase.
 
     0.935
oppD
Putative peptide ABC transport protein; Belongs to the ABC transporter superfamily.
 0.917
oppF
Putative peptide ABC transport protein; Belongs to the ABC transporter superfamily.
 0.891
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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