STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI0257Putative sensor histidine kinase. (396 aa)    
Predicted Functional Partners:
GDI3287
Putative histidine kinase.
0.984
GDI3286
Putative two-component sensor histidine kinase/response regulator hybrid protein.
 
 0.969
GDI3812
Putative signalling protein, GGDEF family.
  
 0.950
kdpC
Potassium-transporting ATPase C chain.
  
  
 0.937
kdpB
Potassium-transporting ATPase B chain.
  
  
 0.918
cheA-2
Putative chemotaxis protein cheA.
 
 
 0.909
GDI1867
Putative signalling protein, GGDEF family.
  
 0.900
GDI0815
Putative response regulator protein.
 
 0.843
phoB
Putative phosphate regulon transcriptional regulatory protein phoB.
 
 0.836
GDI1236
Putative histidine kinase.
 
 
 0.831
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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