STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI0350Putative transcriptional regulator protein, family lacI. (366 aa)    
Predicted Functional Partners:
GDI3286
Putative two-component sensor histidine kinase/response regulator hybrid protein.
   
 0.994
GDI0351
Conserved hypothetical protein.
 
     0.885
cheA-2
Putative chemotaxis protein cheA.
   
 0.759
GDI0353
Putative oxidoreductase protein.
 
     0.690
GDI0352
Putative short-chain dehydrogenase/reductase.
 
     0.663
GDI0355
Putative ABC transporter ATP-binding protein.
  
  0.644
iolC
Putative myo-inositol catabolism, sugar kinase protein.
 
    0.625
rbsC
Putative ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.598
iolD
Putative acetolactate synthase large subunit.
  
     0.547
GDI2632
Putative ABC transporter, ATP-binding protein.
  
  0.534
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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