STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsCPutative ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (391 aa)    
Predicted Functional Partners:
GDI0355
Putative ABC transporter ATP-binding protein.
  0.894
GDI0354
Putative periplasmic binding proteins.
 
  0.887
GDI2629
Conserved hypothetical protein.
  
  0.843
iolC
Putative myo-inositol catabolism, sugar kinase protein.
    0.837
rbsB-4
D-ribose-binding periplasmic protein precursor.
 
  0.806
IolB
Putative myo-inositol catabolism protein.
 
    0.804
iolD
Putative acetolactate synthase large subunit.
 
     0.789
iolE
Putative Sugar phosphate isomerases/epimerases.
 
    0.788
GDI0357
Hypothetical protein.
       0.773
GDI2632
Putative ABC transporter, ATP-binding protein.
 
  0.773
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.