STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IolBPutative myo-inositol catabolism protein. (266 aa)    
Predicted Functional Partners:
iolC
Putative myo-inositol catabolism, sugar kinase protein.
 
 0.999
iolE
Putative Sugar phosphate isomerases/epimerases.
  
 0.996
idhA
Putative inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
  
 0.964
iolD
Putative acetolactate synthase large subunit.
 
     0.946
GDI0353
Putative oxidoreductase protein.
 
  
 0.918
GDI0359
Putative sugar isomerase.
 
   
 0.879
GDI1577
Conserved hypothetical protein.
   
    0.863
mmsA
Puative methylmalonate-semialdehyde dehydrogenase.
 
  
 0.849
GDI0702
Inosine-guanosine kinase.
  
 
 0.810
rbsC
Putative ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.804
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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