Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GDI0443Conserved hypothetical protein. (69 aa)    
Predicted Functional Partners:
GDI0442
Conserved hypothetical protein.
 
  
 0.952
fdxB
Putative ferredoxin protein.
 
    0.950
nifX
Protein nifX.
 
    0.927
nifN
Nitrogenase iron-molybdenum cofactor biosynthesis protein nifN; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.906
nifQ
Protein nifQ.
 
    0.886
nifE
Nitrogenase iron-molybdenum cofactor biosynthesis protein nifE; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.882
GDI0432
Conserved hypothetical protein.
 
    0.859
nifW
Nitrogenase-stabilizing/protective protein nifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.858
fixU
Putative fixU protein.
 
    0.820
GDI0435
Conserved hypothetical protein.
 
    0.815
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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