Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lsdIPutative pseudopilin I precursor. (134 aa)    
Predicted Functional Partners:
lsdJ
Putative pseudopilin J precursor.
  
 0.989
GDI0481
Putative type II secretion pathway kinase GspE.
 
 0.986
lsdH
Putative pseudopilin H precursor.
 
   
 0.980
lsdF
Putative general secretion pathway protein F.
 
  
 0.979
lsdK
Putative general secretion pathway protein K.
 
 
 0.979
lsdL
Putative general secretion pathway protein L.
 
   
 0.918
lsdD
Putative general secretion pathway protein D.
 
 
 0.906
gspO
Putative prepilin peptidase and N-methyltransferase O; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.875
GDI0479
Putative pseudopilin G precursor.
 
     0.846
bfpH
Putative BfpH protein (involved in biogenesis of type IV pili).
 
     0.752
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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