STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydBPutative cytochrome d ubiquinol oxidase subunit 2. (335 aa)    
Predicted Functional Partners:
cydA
Putative cytochrome d ubiquinol oxidase subunit 1.
 
 0.999
cydD
Putative transport ATP-binding protein cydD.
 
  
 0.957
cydC
Putative transport ATP-binding protein cydC.
 
  
 0.940
GDI0533
Putative membrane protein.
       0.773
fliQ
Putative flagellar biosynthetic protein fliQ.
    
   0.732
flgH
Putative flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
    
   0.732
flgF
Putative flagellar basal-body rod protein flgF; Belongs to the flagella basal body rod proteins family.
    
   0.732
GDI2620
Putative 4Fe-4S ferredoxin, iron-sulfur binding; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.577
ndh
Putative NADH dehydrogenase.
 
   
 0.542
GDI0536
Putative membrane protein.
       0.475
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.