Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GDI0597Conserved hypothetical protein. (276 aa)    
Predicted Functional Partners:
GDI0598
Conserved hypothetical protein.
  
 0.999
GDI0599
Putative antibiotic biosynthesis monooxygenase.
       0.773
GDI0595
NAD(P)H nitroreductase.
       0.746
GDI0596
Conserved hypothetical protein.
       0.746
GDI3286
Putative two-component sensor histidine kinase/response regulator hybrid protein.
     
  0.707
GDI0600
Putative transcriptional regulator, GntR family.
       0.605
GDI0601
Putative transcriptional Regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.605
nifA
Nif-specific regulatory protein.
 
   
  0.592
ntrX
Nitrogen assimilation regulatory protein ntrX.
 
   
  0.456
ntrC
Putative nitrogen assimilation regulatory protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.
 
   
  0.456
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.