STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glxKGlycerate kinase; Belongs to the glycerate kinase type-1 family. (379 aa)    
Predicted Functional Partners:
tadA
Putative cytidine deaminase protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.900
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutas; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.848
cdaR
Putative carbohydrate diacid regulator.
 
    0.835
GDI0624
Putative transporter protein.
       0.615
murD
Putative UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
      0.551
GDI2166
6-phosphogluconate dehydrogenase, NAD-binding.
  
 
 0.546
gntT
Putative gluconate permease.
  
  
 0.541
GDI1197
D-2-hydroxyacid dehydrogensase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.540
tkrA
2-ketogluconate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.540
GDI3263
Putative amidohydrolase.
 
 
  0.487
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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