STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI0675Putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (288 aa)    
Predicted Functional Partners:
GDI2396
Putative fatty acid synthase.
   
 0.944
gltB
Putative glutamate synthase [NADPH] large chain precursor.
    
  0.877
GDI0674
Putative two-component sensor histidine kinase.
       0.773
GDI3269
Dehydrogenase.
  
 
  0.764
GDI3734
Putative short-chain dehydrogenases/reductases family.
  
 
  0.752
GDI0231
Putative 3-oxoacyl-[acyl-carrier-protein] reductase.
  
 
  0.712
GDI1733
Acetoin(diacetyl) reductase.
  
 
  0.696
budA
Acetoin(diacetyl) reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.682
GDI2727
Conserved hypothetical protein.
  
 
  0.664
GDI2667
Putative oxidoreductase.
  
 
  0.651
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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