Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
GntRPutative transcriptional regulator, GntR family. (227 aa)    
Predicted Functional Partners:
GDI0683
Conserved hypothetical protein.
       0.773
GDI2668
Putative transcriptional regulator, GntR family.
  
  
 0.716
gudP
Putative glucarate transporter.
 
     0.706
AraC-2
Putative AraC-family transcriptional regulator.
  
  
 0.626
marR
Putative transcriptional regulator, family MarR.
      
 0.620
MarR
Putative transcriptional regulator, MarR family.
      
 0.620
MarR-2
Putative transcriptional regulator marR.
      
 0.620
AsnC
Putative transcriptional regulator, AsnC family.
      
 0.618
AsnC-2
Putative transcriptional regulator, AsnC family.
      
 0.618
nmrA
Putative transcriptional regulator.
      
 0.618
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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