STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI0683Conserved hypothetical protein. (181 aa)    
Predicted Functional Partners:
cynT
Carbonic anhydrase 1; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.990
GntR
Putative transcriptional regulator, GntR family.
       0.773
GDI2589
Conserved hypothetical protein.
      0.739
GDI2416
Putative glyoxylase I family protein.
 
 
    0.724
gudP
Putative glucarate transporter.
       0.603
crt
Putative 3-hydroxybutyryl-CoA dehydratase.
 
  
 0.577
GDI1081
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
    
  0.459
GDI2023
Putative aminotransferase protein; Belongs to the DegT/DnrJ/EryC1 family.
    
  0.459
GDI0184
Thioredoxin protein.
    
   0.455
trxA
Putative thioredoxin; Belongs to the thioredoxin family.
    
   0.455
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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