Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GDI0701Conserved protein. (219 aa)    
Predicted Functional Partners:
GDI2335
Putative membrane protein.
 
     0.726
GDI1460
Conserved hypothetical protein.
  
     0.681
GDI2117
Organic solvent tolerance protein.
  
     0.657
GDI2213
Conserved protein.
  
     0.642
ompH
Putative outer membrane protein.
  
     0.616
GDI2144
Outer membrane protein.
  
     0.606
GDI1883
Conserved protein.
  
     0.603
GDI0702
Inosine-guanosine kinase.
       0.550
mreC
Putative rod shape-determining protein mreC; Involved in formation and maintenance of cell shape.
 
     0.484
GDI0864
Putative toluene tolerance.
  
     0.479
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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