Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
viuBPutative vibriobactin utilization protein viuB. (257 aa)    
Predicted Functional Partners:
GDI0892
Putative transcriptional Regulator, PadR-like family.
   
 0.957
GDI3499
Putative ABC transporter protein.
   
  0.905
GDI0053
Putative ABC transporter.
   
 0.675
GDI2287
Putative ABC transporter, ATP-binding protein.
   
 0.675
GDI3354
Putative ABC transporter protein.
   
 0.675
GDI2062
Periplasmic binding protein.
 
 0.531
GDI2077
Putative glutathione peroxidase; Belongs to the glutathione peroxidase family.
 
      0.518
btuC
Putative vitamin B12 import system permease protein btuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.503
feuB
Putative ABC-type Fe3+ transport system permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.490
pabB
Putative Para-aminobenzoate synthase.
   
  
 0.478
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.