Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GDI1000Putative multidrug efflux transporter protein. (573 aa)    
Predicted Functional Partners:
GDI0998
Putative secretion protein, HlyD-family.
 
   0.923
GDI0236
Putative secretion protein, HlyD-family.
  
   0.847
GDI1613
Putative secretion protein, HlyD-family.
  
   0.838
emrA
Multidrug resistance protein A.
  
   0.837
GDI2848
Putative multidrug resistance protein.
 
     0.757
GDI2018
Putative secretion protein, HlyD-family.
  
   0.731
GDI0349
Putative drug resistance transporter; Belongs to the major facilitator superfamily.
  
     0.677
GDI0999
Hypothetical protein.
       0.671
GDI0690
Putative MFS transporter; Belongs to the major facilitator superfamily.
  
     0.670
GDI3254
Putative transporter protein.
  
     0.645
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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