STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1004Hypothetical protein. (189 aa)    
Predicted Functional Partners:
gstA
Putative glutathione S-transferase; Belongs to the GST superfamily.
       0.723
GDI0557
Putative porin protein.
  
     0.669
GDI0599
Putative antibiotic biosynthesis monooxygenase.
  
     0.661
GDI1515
Putative type I secretion outer membrane protein, TolC.
  
     0.632
GDI0120
Putative metallophosphoesterase.
  
     0.576
GDI1602
Hypothetical membrane protein; Putative Fusaric acid resistance protein.
  
     0.527
GDI1514
Putative resistence protein.
  
     0.504
GDI3166
Putative fusaric acid resistence protein.
  
     0.504
GDI2718
Putative TonB-dependent receptor.
  
     0.494
GDI0552
TonB-dependent receptor.
  
     0.464
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.